Jawaharlal Nehru University 

Web resource for draft genome sequence and annotation of Oryza coarctata (wild halophyte rice) genome

Singh, U., Khemka, N., Rajkumar, M. S., Garg, R., & Jain, M. (2017). PLncPRO for prediction of long non-coding RNAs (lncRNAs) in plants and its application for discovery of abiotic stress-responsive lncRNAs in rice and chickpea. Nucleic Acids Research, 45(22),e183. [Article]

National Institute of Plant Genome Research

Patel RK, Jain M(2012). NGS QC Toolkit: A toolkit for quality control of next generation sequencing data. PLoS ONE, 7(2): e30619.

Patel RK, Jain M(2011). PlantRGS: A web server for the identification of most suitable candidate reference genes for quantitative gene expression studies in plants. DNA Res., 18 (6): 463-470.

Garg R, Patel RK, Jhanwar S, Priya P, Bhattacharjee A, Yadav G, Bhatia S, Chattopadhyay D, Tyagi AK, Jain M (2011). Gene discovery and tissue-specific transcriptome analysis in chickpea with massively parallel pyrosequencing and web resource development Plant Physiol., 156: 1661-1678.

Priya P, Jain M (2013). RiceSRTFDB: A database of rice transcription factors containing comprehensive expression, cis-regulatory element and mutant information to facilitate gene function analysis. Database (Oxford)., 2013: bat027.

Garg R, Verma M, Agrawal S, Shankar R, Majee M, Jain M (2014). Deep Transcriptome Sequencing of Wild Halophyte Rice, Porteresia coarctata, Provides Novel Insights into the Salinity and Submergence Tolerance Factors. DNA Res. 21: 69-84. 

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Professor Mukesh Jain

Room No. 21
School of Computational and Integrative Sciences
Jawaharlal Nehru University, New Delhi-110067. INDIA
Off. Phone : 91 11 26704686
Email: mjain@jnu.ac.in mjainanid@gmail.com