Welcome to DBS-PSSM (Version 3; December 2007 update):
Prediction of DNA-binding residues by evolutionary profile and neural networks.

We recommend to als use our more recent prediction tool, SDCPred, a dinucleotide specific predictor of DBS on proteins.
Click Here to access SDCPred.

For a large scale prediction of hundreds of sequences, please contact me.

Version 2 has been uploaded on September 1, 2007.
Version 3 has been uploaded on December 7, 2007 (some changes in the interface are still being carried out). Changes in version 3 can be found here

Please enter your sequence in a single letter code.

A test sequence is provided below. Copy the sequence and paste in the above text box to see how dbs-pssm works.

Please cite:
PSSM based prediction of DNA-binding sites in proteins,
Shandar Ahmad and Akinori Sarai BMC Bioinformatics2005, 6:33
Read the Article
Comments and feedback to: shandar@netasa.org