Resources & Support



SERVICES PROVIDED BY CCBB-

The Services provided by the Centre can be summarized as follows:

  1. Sequence analysis.
  2. Routine sequence analysis support software is provided to the user community by the scientific staff.
  3. National Facility for molecular modeling (Northern Region). Used for training during workshops and research by groups on campus
  4. Mirror Biological data for use on BioGRID.
  5. High-performance computational facilities along with university facility.


FACILITIES AVAILABLE AT CCBB

A. Computational Facilities

System
 

Operating system

Application

Quantity
 

260 Processor Sun Fire X4200             Centos 5.3 High Performance Computing 1
48 processor Opteron cluster             Centos 5 High Performance Computing       1
HP Proliant ML150G6                     RHEL5 Web Server 1
HCL Infinity xcel line 2200 series             Linux Web Server/User specific 10
Sun Ultra 40 Workstation             RHEL5 GOLD/Schrodinger Suite/GOLPE/GRID/ Flex-X 3

System
 

Quantity
 

Server  

20  

Personal Computers  

100  


B. Software


 Software

Application

Adobe Acrobat 5.0

PDF Read/Writer

Adobe Illustrator 7.0

Graphics Designing

Adobe Photoshop

Graphics Designing

Adobe PageMaker 6.0

Desktop Publisher

Amber 7

Molecular Simulation programs

ADF

Quantum chemistry programs

Chem Office

Drawing, Modeling,MSDX, ACX

Chems 32

OpenMP Compiler with suitable performance & necessary support for reasearch

CHARMM & AMBER

Molecular dynamics simulation

Corina 2.6

Molecular Networks GmbH (Structure Generator)

Discovery Studio, Modeling, MedChem

Discovery studio

Dragon

Descriptor for QSAR

Front Page

Web designing

FlexX

Docking & scoring SW

Gold

Docking SW

GROMOS 96

Biomolecular simulation software

MATLAB (Win/Linux)

Mathematical software

Mathematica

Mathematical software

MOE 2002.03

Databases

MS Insight II 98.0

Accelrys Scientifc Business Intelligence Software - Discovery Studio Free

Oracel 10G

Databases designing

PC Cillin 200 Anti Virus

Anti virus

QCPE

Quantum Chemistry Programme Exchange

Schrodinger

Molecular Modeling

Sigma Plot 8.2

Exact Graphs & Data Analysis

Sigma Stat 2.0.3

Statistical calculation

Smar Cop 3.4

Anti virus

SYBYL (limited )

Computational Informatics Software for Molecular Modelers

Visual Basic 6.0

Database desiging

Visual C++

Programming compiler

WHATIF

In Silico Macromolecular structure

Explain™

Biobase Database online access